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SRX20611563: GSM7462083: human primary CD4+ T cells, Donor 3, Inf; Homo sapiens; RNA-Seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 26.7M spots, 8.1G bases, 2.3Gb downloads

External Id: GSM7462083_r1
Submitted by: The University of Hong Kong
Study: Effect of nicotinamide mononucleotide on gene expression of CD4+ T cells with HIV-1 infection or mock infection
show Abstracthide Abstract
To investigate the effect of nicotinamide mononucleotide (NMN) on CD4+ T cells, primary human CD4+ T cells purified from peripheral blood mononuclear cells of healthy donors were treated without or with NMN. Expression profiling analysis on either host gene or viral gene was performed using data obtained from bulk RNA-seq of NMN-treated and untreated (control) CD4+ T cells at 48 hours post treatment and/or post infection. Overall design: Gene expression profiling analysis of RNA-seq data compared between NMN-treated and untreated (control) CD4+ T cells, or viral gene expression profiling analysis compared among NMN-treated and untreated CD4+ T cells with HIV infection using mock infection as control.
Sample: human primary CD4+ T cells, Donor 3, Inf
SAMN35652232 • SRS17911445 • All experiments • All runs
Organism: Homo sapiens
Library:
Name: GSM7462083
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: RNA was harvested using AllPrep DNA/RNA Mini Kit (Qiagen). 100 ng of total RNA was used for the construction of sequencing libraries. RNA libraries for RNA-seq were prepared using KAPA mRNA HyperPrep Kit (KR1352-v3.16) following manufacturer's protocols.
Runs: 1 run, 26.7M spots, 8.1G bases, 2.3Gb
Run# of Spots# of BasesSizePublished
SRR2484739726,672,5628.1G2.3Gb2023-10-28

ID:
28040272

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